Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.73□□□□□ -0.21
Sox4Q06831 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox4Q06831 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox4Q06831 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox4Q06831 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox4Q06831 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sox4Q06831 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm21854-201ENSMUST00000179901 471 ntBASIC13.72□□□□□ -0.21
Sox4Q06831 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm9797-201ENSMUST00000052902 613 ntBASIC13.72□□□□□ -0.21
Sox4Q06831 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.72□□□□□ -0.21
Sox4Q06831 Mir497b-201ENSMUST00000093601 125 ntBASIC13.72□□□□□ -0.21
Sox4Q06831 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sox4Q06831 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox4Q06831 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.72□□□□□ -0.21
Sox4Q06831 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.72□□□□□ -0.21
Sox4Q06831 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox4Q06831 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.71□□□□□ -0.21
Sox4Q06831 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Sox4Q06831 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Rubie-203ENSMUST00000227803 2430 ntBASIC13.71□□□□□ -0.21
Sox4Q06831 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox4Q06831 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.71□□□□□ -0.21
Sox4Q06831 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.71□□□□□ -0.21
Sox4Q06831 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.71□□□□□ -0.21
Sox4Q06831 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Sox4Q06831 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox4Q06831 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.71□□□□□ -0.21
Sox4Q06831 Gm42612-201ENSMUST00000197986 623 ntBASIC13.71□□□□□ -0.21
Sox4Q06831 Gm43170-201ENSMUST00000199827 612 ntBASIC13.71□□□□□ -0.21
Sox4Q06831 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.71□□□□□ -0.21
Sox4Q06831 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.71□□□□□ -0.21
Sox4Q06831 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.71□□□□□ -0.21
Sox4Q06831 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox4Q06831 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox4Q06831 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox4Q06831 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox4Q06831 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sox4Q06831 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.71□□□□□ -0.22
Sox4Q06831 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sox4Q06831 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox4Q06831 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox4Q06831 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox4Q06831 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox4Q06831 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.7□□□□□ -0.22
Sox4Q06831 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sox4Q06831 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms