Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.98□□□□□ -0.49
Smn1P97801 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smn1P97801 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Smn1P97801 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Smn1P97801 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.97□□□□□ -0.49
Smn1P97801 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Smn1P97801 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Smn1P97801 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Smn1P97801 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Smn1P97801 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.97□□□□□ -0.49
Smn1P97801 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.97□□□□□ -0.49
Smn1P97801 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Smn1P97801 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Smn1P97801 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Smn1P97801 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Smn1P97801 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Smn1P97801 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Smn1P97801 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.96□□□□□ -0.49
Smn1P97801 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smn1P97801 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smn1P97801 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Smn1P97801 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Gm27920-201ENSMUST00000183953 96 ntBASIC11.96□□□□□ -0.49
Smn1P97801 Gm17971-201ENSMUST00000190239 806 ntBASIC11.96□□□□□ -0.49
Smn1P97801 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Smn1P97801 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.96□□□□□ -0.49
Smn1P97801 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.96□□□□□ -0.49
Smn1P97801 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.96□□□□□ -0.49
Smn1P97801 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Smn1P97801 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Smn1P97801 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.96□□□□□ -0.5
Smn1P97801 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Smn1P97801 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Smn1P97801 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.95□□□□□ -0.5
Smn1P97801 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Smn1P97801 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms