Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm45668-201ENSMUST00000211271 493 ntBASIC15.28■□□□□ 0.04
Lig3P97386 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Gm20445-201ENSMUST00000061905 565 ntBASIC15.28■□□□□ 0.04
Lig3P97386 Gm15823-201ENSMUST00000064305 670 ntBASIC15.28■□□□□ 0.04
Lig3P97386 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lig3P97386 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.28■□□□□ 0.04
Lig3P97386 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.28■□□□□ 0.04
Lig3P97386 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lig3P97386 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Lig3P97386 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Lig3P97386 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.27■□□□□ 0.04
Lig3P97386 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Lig3P97386 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.27■□□□□ 0.04
Lig3P97386 Gm9719-201ENSMUST00000162765 543 ntBASIC15.27■□□□□ 0.04
Lig3P97386 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.27■□□□□ 0.04
Lig3P97386 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.27■□□□□ 0.04
Lig3P97386 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.27■□□□□ 0.04
Lig3P97386 Shd-206ENSMUST00000225145 998 ntBASIC15.27■□□□□ 0.04
Lig3P97386 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.27■□□□□ 0.04
Lig3P97386 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lig3P97386 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Lig3P97386 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15.27■□□□□ 0.03
Lig3P97386 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Lig3P97386 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lig3P97386 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.27■□□□□ 0.03
Lig3P97386 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Lig3P97386 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lig3P97386 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Lig3P97386 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.26■□□□□ 0.03
Lig3P97386 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.26■□□□□ 0.03
Lig3P97386 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Lig3P97386 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.26■□□□□ 0.03
Lig3P97386 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.26■□□□□ 0.03
Lig3P97386 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.26■□□□□ 0.03
Lig3P97386 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.26■□□□□ 0.03
Lig3P97386 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.26■□□□□ 0.03
Lig3P97386 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.26■□□□□ 0.03
Lig3P97386 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.26■□□□□ 0.03
Lig3P97386 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lig3P97386 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.26■□□□□ 0.03
Lig3P97386 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms