Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Gm18263-201ENSMUST00000220846 1928 ntBASIC16.07■□□□□ 0.16
Tpm2P58774 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm2P58774 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm2P58774 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tpm2P58774 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Tpm2P58774 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.06■□□□□ 0.16
Tpm2P58774 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.06■□□□□ 0.16
Tpm2P58774 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.06■□□□□ 0.16
Tpm2P58774 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.06■□□□□ 0.16
Tpm2P58774 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.06■□□□□ 0.16
Tpm2P58774 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.06■□□□□ 0.16
Tpm2P58774 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Tpm2P58774 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Tpm2P58774 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tpm2P58774 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC16.05■□□□□ 0.16
Tpm2P58774 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.05■□□□□ 0.16
Tpm2P58774 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.05■□□□□ 0.16
Tpm2P58774 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.05■□□□□ 0.16
Tpm2P58774 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.05■□□□□ 0.16
Tpm2P58774 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.05■□□□□ 0.16
Tpm2P58774 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tpm2P58774 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tpm2P58774 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Tpm2P58774 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.04■□□□□ 0.16
Tpm2P58774 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Tpm2P58774 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tpm2P58774 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Tpm2P58774 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Tpm2P58774 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.04■□□□□ 0.16
Tpm2P58774 Gm13036-201ENSMUST00000117799 748 ntBASIC16.04■□□□□ 0.16
Tpm2P58774 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Tpm2P58774 Gm28659-201ENSMUST00000188013 759 ntBASIC16.04■□□□□ 0.16
Tpm2P58774 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.04■□□□□ 0.16
Tpm2P58774 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Tpm2P58774 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Tpm2P58774 Gm20554-201ENSMUST00000177421 2352 ntBASIC16.04■□□□□ 0.16
Tpm2P58774 AC125108.1-201ENSMUST00000218986 2330 ntBASIC16.03■□□□□ 0.16
Tpm2P58774 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm2P58774 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Tpm2P58774 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms