Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.03□□□□□ -0.16
SmoP56726 Gm18624-201ENSMUST00000220966 658 ntBASIC14.03□□□□□ -0.16
SmoP56726 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.03□□□□□ -0.16
SmoP56726 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SmoP56726 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.03□□□□□ -0.16
SmoP56726 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.03□□□□□ -0.16
SmoP56726 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.03□□□□□ -0.16
SmoP56726 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SmoP56726 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SmoP56726 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SmoP56726 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.02□□□□□ -0.16
SmoP56726 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.02□□□□□ -0.17
SmoP56726 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.02□□□□□ -0.17
SmoP56726 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.02□□□□□ -0.17
SmoP56726 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
SmoP56726 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.02□□□□□ -0.17
SmoP56726 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SmoP56726 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SmoP56726 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SmoP56726 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SmoP56726 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SmoP56726 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.01□□□□□ -0.17
SmoP56726 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.01□□□□□ -0.17
SmoP56726 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.01□□□□□ -0.17
SmoP56726 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SmoP56726 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Mir6392-201ENSMUST00000184924 108 ntBASIC14.01□□□□□ -0.17
SmoP56726 Gm18018-201ENSMUST00000198273 408 ntBASIC14.01□□□□□ -0.17
SmoP56726 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SmoP56726 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.01□□□□□ -0.17
SmoP56726 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Gm6180-201ENSMUST00000065243 498 ntBASIC14.01□□□□□ -0.17
SmoP56726 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SmoP56726 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SmoP56726 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14□□□□□ -0.17
SmoP56726 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SmoP56726 Gm23984-201ENSMUST00000157139 203 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms