Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nkx2-1P50220 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx2-1P50220 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx2-1P50220 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Nkx2-1P50220 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.58□□□□□ -0.56
Nkx2-1P50220 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.58□□□□□ -0.56
Nkx2-1P50220 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.58□□□□□ -0.56
Nkx2-1P50220 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nkx2-1P50220 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.57□□□□□ -0.56
Nkx2-1P50220 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Gm37230-201ENSMUST00000194491 818 ntBASIC11.57□□□□□ -0.56
Nkx2-1P50220 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.57□□□□□ -0.56
Nkx2-1P50220 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.57□□□□□ -0.56
Nkx2-1P50220 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nkx2-1P50220 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms