Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.99□□□□□ -0.33
Ptx3P48759 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptx3P48759 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptx3P48759 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.99□□□□□ -0.33
Ptx3P48759 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.99□□□□□ -0.33
Ptx3P48759 Gm11424-201ENSMUST00000121929 829 ntBASIC12.99□□□□□ -0.33
Ptx3P48759 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.99□□□□□ -0.33
Ptx3P48759 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.99□□□□□ -0.33
Ptx3P48759 Gm18027-201ENSMUST00000218947 619 ntBASIC12.99□□□□□ -0.33
Ptx3P48759 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.99□□□□□ -0.33
Ptx3P48759 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ptx3P48759 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptx3P48759 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptx3P48759 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.99□□□□□ -0.33
Ptx3P48759 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ptx3P48759 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ptx3P48759 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ptx3P48759 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.98□□□□□ -0.33
Ptx3P48759 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.98□□□□□ -0.33
Ptx3P48759 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.98□□□□□ -0.33
Ptx3P48759 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.98□□□□□ -0.33
Ptx3P48759 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ptx3P48759 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.98□□□□□ -0.33
Ptx3P48759 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.98□□□□□ -0.33
Ptx3P48759 Gm19220-201ENSMUST00000222682 803 ntBASIC12.98□□□□□ -0.33
Ptx3P48759 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.98□□□□□ -0.33
Ptx3P48759 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ptx3P48759 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ptx3P48759 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ptx3P48759 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.97□□□□□ -0.33
Ptx3P48759 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.97□□□□□ -0.33
Ptx3P48759 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.97□□□□□ -0.33
Ptx3P48759 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ptx3P48759 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ptx3P48759 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ptx3P48759 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ptx3P48759 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms