Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Prox1P48437 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prox1P48437 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prox1P48437 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Prox1P48437 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Prox1P48437 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Prox1P48437 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.43□□□□□ -0.26
Prox1P48437 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.43□□□□□ -0.26
Prox1P48437 Gm12350-201ENSMUST00000121208 462 ntBASIC13.43□□□□□ -0.26
Prox1P48437 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.43□□□□□ -0.26
Prox1P48437 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Gm16026-204ENSMUST00000162652 683 ntBASIC13.43□□□□□ -0.26
Prox1P48437 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.43□□□□□ -0.26
Prox1P48437 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.43□□□□□ -0.26
Prox1P48437 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.43□□□□□ -0.26
Prox1P48437 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.43□□□□□ -0.26
Prox1P48437 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Prox1P48437 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.42□□□□□ -0.26
Prox1P48437 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.42□□□□□ -0.26
Prox1P48437 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.42□□□□□ -0.26
Prox1P48437 Gm27628-201ENSMUST00000184911 107 ntBASIC13.42□□□□□ -0.26
Prox1P48437 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.42□□□□□ -0.26
Prox1P48437 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.42□□□□□ -0.26
Prox1P48437 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Prox1P48437 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Prox1P48437 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prox1P48437 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Prox1P48437 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prox1P48437 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prox1P48437 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Prox1P48437 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Prox1P48437 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Prox1P48437 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prox1P48437 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Prox1P48437 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Prox1P48437 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prox1P48437 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Prox1P48437 Mir5126-201ENSMUST00000175513 77 ntBASIC13.41□□□□□ -0.26
Prox1P48437 Gm8000-201ENSMUST00000188378 592 ntBASIC13.41□□□□□ -0.26
Prox1P48437 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms