Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.22□□□□□ -0.29
Cdx2P43241 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx2P43241 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx2P43241 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdx2P43241 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cdx2P43241 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.22□□□□□ -0.29
Cdx2P43241 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdx2P43241 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdx2P43241 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdx2P43241 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdx2P43241 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.21□□□□□ -0.29
Cdx2P43241 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cdx2P43241 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdx2P43241 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Gm18054-201ENSMUST00000207539 555 ntBASIC13.21□□□□□ -0.29
Cdx2P43241 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdx2P43241 Gm6013-201ENSMUST00000212264 699 ntBASIC13.21□□□□□ -0.29
Cdx2P43241 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.21□□□□□ -0.29
Cdx2P43241 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdx2P43241 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Cdx2P43241 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.21□□□□□ -0.29
Cdx2P43241 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx2P43241 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx2P43241 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx2P43241 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Cdx2P43241 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx2P43241 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cdx2P43241 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cdx2P43241 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cdx2P43241 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cdx2P43241 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Cdx2P43241 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Cdx2P43241 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Cdx2P43241 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdx2P43241 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cdx2P43241 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cdx2P43241 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdx2P43241 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Proscos-202ENSMUST00000178990 666 ntBASIC13.2□□□□□ -0.3
Cdx2P43241 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Gm45880-201ENSMUST00000213041 853 ntBASIC13.2□□□□□ -0.3
Cdx2P43241 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.2□□□□□ -0.3
Cdx2P43241 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.2□□□□□ -0.3
Cdx2P43241 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdx2P43241 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdx2P43241 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Cdx2P43241 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.19□□□□□ -0.3
Cdx2P43241 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
Cdx2P43241 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Cdx2P43241 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.19□□□□□ -0.3
Cdx2P43241 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdx2P43241 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.19□□□□□ -0.3
Cdx2P43241 Gm27331-201ENSMUST00000183705 60 ntBASIC13.19□□□□□ -0.3
Cdx2P43241 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.19□□□□□ -0.3
Cdx2P43241 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Cdx2P43241 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms