Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cntn1P12960 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cntn1P12960 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.4□□□□□ -0.26
Cntn1P12960 Gm11424-201ENSMUST00000121929 829 ntBASIC13.4□□□□□ -0.26
Cntn1P12960 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cntn1P12960 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Cntn1P12960 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cntn1P12960 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cntn1P12960 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.4□□□□□ -0.26
Cntn1P12960 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Cntn1P12960 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Cntn1P12960 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Cntn1P12960 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Cntn1P12960 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cntn1P12960 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cntn1P12960 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cntn1P12960 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.4□□□□□ -0.27
Cntn1P12960 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cntn1P12960 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.39□□□□□ -0.27
Cntn1P12960 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Gm14928-201ENSMUST00000120198 477 ntBASIC13.39□□□□□ -0.27
Cntn1P12960 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Gm4804-201ENSMUST00000182234 999 ntBASIC13.39□□□□□ -0.27
Cntn1P12960 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.39□□□□□ -0.27
Cntn1P12960 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.39□□□□□ -0.27
Cntn1P12960 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.39□□□□□ -0.27
Cntn1P12960 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cntn1P12960 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cntn1P12960 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Cntn1P12960 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cntn1P12960 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cntn1P12960 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cntn1P12960 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cntn1P12960 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.38□□□□□ -0.27
Cntn1P12960 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.38□□□□□ -0.27
Cntn1P12960 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.38□□□□□ -0.27
Cntn1P12960 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Cntn1P12960 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.38□□□□□ -0.27
Cntn1P12960 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cntn1P12960 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.38□□□□□ -0.27
Cntn1P12960 Gm5745-201ENSMUST00000183748 313 ntBASIC13.38□□□□□ -0.27
Cntn1P12960 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.38□□□□□ -0.27
Cntn1P12960 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC13.38□□□□□ -0.27
Cntn1P12960 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.38□□□□□ -0.27
Cntn1P12960 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms