Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P04940 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P04940 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Gm10729-202ENSMUST00000193403 1375 ntBASIC11.32□□□□□ -0.6
P04940 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.32□□□□□ -0.6
P04940 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P04940 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.32□□□□□ -0.6
P04940 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.32□□□□□ -0.6
P04940 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.32□□□□□ -0.6
P04940 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC11.32□□□□□ -0.6
P04940 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04940 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
P04940 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
P04940 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
P04940 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P04940 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P04940 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
P04940 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P04940 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P04940 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.31□□□□□ -0.6
P04940 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
P04940 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.31□□□□□ -0.6
P04940 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.31□□□□□ -0.6
P04940 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
P04940 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.31□□□□□ -0.6
P04940 Gm7775-201ENSMUST00000218871 853 ntBASIC11.31□□□□□ -0.6
P04940 Gm9063-201ENSMUST00000223299 582 ntBASIC11.31□□□□□ -0.6
P04940 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.31□□□□□ -0.6
P04940 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.31□□□□□ -0.6
P04940 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
P04940 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.31□□□□□ -0.6
P04940 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P04940 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
P04940 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P04940 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.3□□□□□ -0.6
P04940 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P04940 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P04940 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.3□□□□□ -0.6
P04940 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P04940 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P04940 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms