Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Ank2-226ENSMUST00000189368 339 ntBASIC10.2□□□□□ -0.78
TcraP01849 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
TcraP01849 Gm43347-201ENSMUST00000200226 580 ntBASIC10.2□□□□□ -0.78
TcraP01849 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.2□□□□□ -0.78
TcraP01849 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC10.2□□□□□ -0.78
TcraP01849 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.2□□□□□ -0.78
TcraP01849 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.2□□□□□ -0.78
TcraP01849 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
TcraP01849 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
TcraP01849 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
TcraP01849 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.19□□□□□ -0.78
TcraP01849 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.19□□□□□ -0.78
TcraP01849 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
TcraP01849 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.19□□□□□ -0.78
TcraP01849 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
TcraP01849 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
TcraP01849 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
TcraP01849 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.19□□□□□ -0.78
TcraP01849 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.19□□□□□ -0.78
TcraP01849 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TcraP01849 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.18□□□□□ -0.78
TcraP01849 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
TcraP01849 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.18□□□□□ -0.78
TcraP01849 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.18□□□□□ -0.78
TcraP01849 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
TcraP01849 Gm8584-201ENSMUST00000171982 758 ntBASIC10.18□□□□□ -0.78
TcraP01849 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.18□□□□□ -0.78
TcraP01849 Gm37584-201ENSMUST00000193595 1290 ntBASIC10.18□□□□□ -0.78
TcraP01849 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.18□□□□□ -0.78
TcraP01849 AC159301.1-201ENSMUST00000225130 1182 ntBASIC10.18□□□□□ -0.78
TcraP01849 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.18□□□□□ -0.78
TcraP01849 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TcraP01849 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms