Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.17□□□□□ -0.46
Atf6bO35451 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.17□□□□□ -0.46
Atf6bO35451 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Atf6bO35451 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Atf6bO35451 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.17□□□□□ -0.46
Atf6bO35451 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Gm23547-201ENSMUST00000158210 271 ntBASIC12.16□□□□□ -0.46
Atf6bO35451 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.16□□□□□ -0.46
Atf6bO35451 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.16□□□□□ -0.46
Atf6bO35451 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.16□□□□□ -0.46
Atf6bO35451 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.16□□□□□ -0.46
Atf6bO35451 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.16□□□□□ -0.46
Atf6bO35451 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Atf6bO35451 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Atf6bO35451 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Atf6bO35451 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Gm24543-201ENSMUST00000103867 82 ntBASIC12.15□□□□□ -0.46
Atf6bO35451 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.15□□□□□ -0.46
Atf6bO35451 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Gm38294-201ENSMUST00000192831 381 ntBASIC12.15□□□□□ -0.46
Atf6bO35451 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Gm45453-201ENSMUST00000211758 853 ntBASIC12.15□□□□□ -0.46
Atf6bO35451 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.15□□□□□ -0.46
Atf6bO35451 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Atf6bO35451 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Atf6bO35451 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Atf6bO35451 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Atf6bO35451 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Atf6bO35451 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Atf6bO35451 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Atf6bO35451 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atf6bO35451 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Atf6bO35451 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Atf6bO35451 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.14□□□□□ -0.47
Atf6bO35451 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6bO35451 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Atf6bO35451 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms