Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shisa8J3QNX5 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Gm27301-201ENSMUST00000184012 127 ntBASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Thap2-203ENSMUST00000218989 527 ntBASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shisa8J3QNX5 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Gm9103-201ENSMUST00000119371 405 ntBASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shisa8J3QNX5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms