Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Gm10542F6XDR3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Gm10542F6XDR3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Gm5479-201ENSMUST00000160578 435 ntBASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Gm27628-201ENSMUST00000184911 107 ntBASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Gm21362-201ENSMUST00000194272 928 ntBASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC9.71□□□□□ -0.86
Gm10542F6XDR3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Gm18244-201ENSMUST00000219747 1566 ntBASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Gm10542F6XDR3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC9.7□□□□□ -0.86
Gm10542F6XDR3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Gm10542F6XDR3 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms