Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
R3hdm1E9Q9Q2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.41■□□□□ 0.06
R3hdm1E9Q9Q2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
R3hdm1E9Q9Q2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
R3hdm1E9Q9Q2 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
R3hdm1E9Q9Q2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Gm14660-201ENSMUST00000119809 575 ntBASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Gm5279-201ENSMUST00000199575 745 ntBASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
R3hdm1E9Q9Q2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Mir3102-201ENSMUST00000175555 104 ntBASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
R3hdm1E9Q9Q2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.38■□□□□ 0.05
R3hdm1E9Q9Q2 Gm37230-201ENSMUST00000194491 818 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms