Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccdc85cE9Q6B2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Gm9755-201ENSMUST00000032981 1356 ntBASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Gm3890-201ENSMUST00000182416 207 ntBASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Gm44100-201ENSMUST00000204329 436 ntBASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Gm44967-201ENSMUST00000207047 631 ntBASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccdc85cE9Q6B2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Gm14726-201ENSMUST00000120623 896 ntBASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Gm37835-201ENSMUST00000193305 361 ntBASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccdc85cE9Q6B2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Gm8793-201ENSMUST00000183069 1303 ntBASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Gm7467-201ENSMUST00000185173 652 ntBASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccdc85cE9Q6B2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms