Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm37935-201ENSMUST00000192012 982 ntBASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm7774-201ENSMUST00000200064 533 ntBASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm43575-201ENSMUST00000196420 516 ntBASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm5779-201ENSMUST00000218467 910 ntBASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm22065-201ENSMUST00000103753 110 ntBASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm22066-201ENSMUST00000103761 110 ntBASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm24932-201ENSMUST00000103763 110 ntBASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm24115-201ENSMUST00000103799 110 ntBASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm22190-201ENSMUST00000103827 110 ntBASIC10.15□□□□□ -0.78
Trav9n-2A0A0G2JDP3 Gm22191-201ENSMUST00000103831 110 ntBASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms