Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Htra1Q9R118 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Htra1Q9R118 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Htra1Q9R118 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Htra1Q9R118 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Htra1Q9R118 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Htra1Q9R118 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Htra1Q9R118 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Htra1Q9R118 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Htra1Q9R118 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.95■□□□□ 0.78
Htra1Q9R118 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Htra1Q9R118 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Htra1Q9R118 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.95■□□□□ 0.78
Htra1Q9R118 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Htra1Q9R118 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Htra1Q9R118 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.95■□□□□ 0.78
Htra1Q9R118 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Htra1Q9R118 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Htra1Q9R118 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Htra1Q9R118 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.94■□□□□ 0.78
Htra1Q9R118 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Htra1Q9R118 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Htra1Q9R118 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Htra1Q9R118 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Htra1Q9R118 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Htra1Q9R118 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Htra1Q9R118 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Htra1Q9R118 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Htra1Q9R118 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Htra1Q9R118 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Htra1Q9R118 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Htra1Q9R118 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Htra1Q9R118 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.92■□□□□ 0.78
Htra1Q9R118 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Htra1Q9R118 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Htra1Q9R118 Gm4799-201ENSMUST00000095396 657 ntBASIC19.92■□□□□ 0.78
Htra1Q9R118 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Htra1Q9R118 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.91■□□□□ 0.78
Htra1Q9R118 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Htra1Q9R118 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.91■□□□□ 0.78
Htra1Q9R118 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.9■□□□□ 0.78
Htra1Q9R118 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Htra1Q9R118 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Htra1Q9R118 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Htra1Q9R118 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Htra1Q9R118 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Htra1Q9R118 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Htra1Q9R118 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Htra1Q9R118 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Htra1Q9R118 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Htra1Q9R118 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Htra1Q9R118 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
Htra1Q9R118 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Htra1Q9R118 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Htra1Q9R118 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Htra1Q9R118 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Htra1Q9R118 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Htra1Q9R118 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Htra1Q9R118 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Htra1Q9R118 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Htra1Q9R118 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Htra1Q9R118 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Htra1Q9R118 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Htra1Q9R118 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Htra1Q9R118 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Htra1Q9R118 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Htra1Q9R118 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Htra1Q9R118 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Htra1Q9R118 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Htra1Q9R118 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Htra1Q9R118 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.87■□□□□ 0.77
Htra1Q9R118 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Htra1Q9R118 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Htra1Q9R118 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Htra1Q9R118 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Htra1Q9R118 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Htra1Q9R118 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Htra1Q9R118 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Htra1Q9R118 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Htra1Q9R118 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Htra1Q9R118 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Htra1Q9R118 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Htra1Q9R118 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Htra1Q9R118 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Htra1Q9R118 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Htra1Q9R118 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Htra1Q9R118 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Htra1Q9R118 Gm9812-201ENSMUST00000061934 968 ntBASIC19.84■□□□□ 0.77
Htra1Q9R118 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Htra1Q9R118 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Htra1Q9R118 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.83■□□□□ 0.77
Htra1Q9R118 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
Htra1Q9R118 Mir3960-201ENSMUST00000198213 73 ntBASIC19.83■□□□□ 0.77
Htra1Q9R118 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Htra1Q9R118 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.83■□□□□ 0.76
Htra1Q9R118 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Htra1Q9R118 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Htra1Q9R118 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Htra1Q9R118 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Htra1Q9R118 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms