Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Nubp2Q9R061 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Nubp2Q9R061 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Nubp2Q9R061 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Nubp2Q9R061 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Nubp2Q9R061 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Nubp2Q9R061 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Nubp2Q9R061 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nubp2Q9R061 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Nubp2Q9R061 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.14■□□□□ 0.65
Nubp2Q9R061 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Nubp2Q9R061 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nubp2Q9R061 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nubp2Q9R061 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nubp2Q9R061 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nubp2Q9R061 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Nubp2Q9R061 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Nubp2Q9R061 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Nubp2Q9R061 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Nubp2Q9R061 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.11■□□□□ 0.65
Nubp2Q9R061 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.11■□□□□ 0.65
Nubp2Q9R061 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nubp2Q9R061 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Nubp2Q9R061 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.1■□□□□ 0.65
Nubp2Q9R061 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nubp2Q9R061 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Nubp2Q9R061 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Nubp2Q9R061 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.1■□□□□ 0.65
Nubp2Q9R061 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nubp2Q9R061 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nubp2Q9R061 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Nubp2Q9R061 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.09■□□□□ 0.65
Nubp2Q9R061 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.09■□□□□ 0.65
Nubp2Q9R061 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.09■□□□□ 0.65
Nubp2Q9R061 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Nubp2Q9R061 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Nubp2Q9R061 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nubp2Q9R061 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nubp2Q9R061 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Nubp2Q9R061 Gm10420-201ENSMUST00000121713 882 ntBASIC19.08■□□□□ 0.64
Nubp2Q9R061 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nubp2Q9R061 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nubp2Q9R061 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nubp2Q9R061 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Nubp2Q9R061 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
Nubp2Q9R061 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Nubp2Q9R061 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Nubp2Q9R061 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Nubp2Q9R061 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.07■□□□□ 0.64
Nubp2Q9R061 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nubp2Q9R061 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nubp2Q9R061 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nubp2Q9R061 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Nubp2Q9R061 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Nubp2Q9R061 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Nubp2Q9R061 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nubp2Q9R061 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nubp2Q9R061 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nubp2Q9R061 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Nubp2Q9R061 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Nubp2Q9R061 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nubp2Q9R061 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Nubp2Q9R061 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nubp2Q9R061 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Nubp2Q9R061 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Nubp2Q9R061 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Nubp2Q9R061 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Nubp2Q9R061 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Nubp2Q9R061 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.03■□□□□ 0.64
Nubp2Q9R061 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms