Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.95■□□□□ 0.62
Nubp1Q9R060 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nubp1Q9R060 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Nubp1Q9R060 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nubp1Q9R060 Gm22238-201ENSMUST00000175222 88 ntBASIC18.94■□□□□ 0.62
Nubp1Q9R060 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nubp1Q9R060 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nubp1Q9R060 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nubp1Q9R060 Gm21956-201ENSMUST00000179946 522 ntBASIC18.92■□□□□ 0.62
Nubp1Q9R060 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nubp1Q9R060 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.92■□□□□ 0.62
Nubp1Q9R060 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.92■□□□□ 0.62
Nubp1Q9R060 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nubp1Q9R060 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.92■□□□□ 0.62
Nubp1Q9R060 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nubp1Q9R060 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nubp1Q9R060 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nubp1Q9R060 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nubp1Q9R060 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nubp1Q9R060 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nubp1Q9R060 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nubp1Q9R060 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.91■□□□□ 0.62
Nubp1Q9R060 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nubp1Q9R060 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Nubp1Q9R060 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nubp1Q9R060 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nubp1Q9R060 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.91■□□□□ 0.62
Nubp1Q9R060 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.9■□□□□ 0.62
Nubp1Q9R060 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nubp1Q9R060 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.9■□□□□ 0.62
Nubp1Q9R060 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.9■□□□□ 0.62
Nubp1Q9R060 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nubp1Q9R060 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nubp1Q9R060 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nubp1Q9R060 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nubp1Q9R060 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nubp1Q9R060 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nubp1Q9R060 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.89■□□□□ 0.61
Nubp1Q9R060 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.89■□□□□ 0.61
Nubp1Q9R060 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.89■□□□□ 0.61
Nubp1Q9R060 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nubp1Q9R060 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.89■□□□□ 0.61
Nubp1Q9R060 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nubp1Q9R060 Gm40881-201ENSMUST00000223397 166 ntBASIC18.88■□□□□ 0.61
Nubp1Q9R060 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.87■□□□□ 0.61
Nubp1Q9R060 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.87■□□□□ 0.61
Nubp1Q9R060 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nubp1Q9R060 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nubp1Q9R060 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nubp1Q9R060 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nubp1Q9R060 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nubp1Q9R060 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nubp1Q9R060 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.86■□□□□ 0.61
Nubp1Q9R060 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nubp1Q9R060 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.86■□□□□ 0.61
Nubp1Q9R060 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.86■□□□□ 0.61
Nubp1Q9R060 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nubp1Q9R060 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nubp1Q9R060 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nubp1Q9R060 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nubp1Q9R060 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nubp1Q9R060 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nubp1Q9R060 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nubp1Q9R060 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nubp1Q9R060 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Nubp1Q9R060 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nubp1Q9R060 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
Nubp1Q9R060 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nubp1Q9R060 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.83■□□□□ 0.6
Nubp1Q9R060 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nubp1Q9R060 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nubp1Q9R060 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nubp1Q9R060 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nubp1Q9R060 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nubp1Q9R060 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.82■□□□□ 0.6
Nubp1Q9R060 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.82■□□□□ 0.6
Nubp1Q9R060 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nubp1Q9R060 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Nubp1Q9R060 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nubp1Q9R060 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nubp1Q9R060 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nubp1Q9R060 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nubp1Q9R060 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nubp1Q9R060 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.81■□□□□ 0.6
Nubp1Q9R060 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nubp1Q9R060 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms