Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sec61a2Q9JLR1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a2Q9JLR1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.46■□□□□ 0.71
Sec61a2Q9JLR1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a2Q9JLR1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a2Q9JLR1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec61a2Q9JLR1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a2Q9JLR1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a2Q9JLR1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.42■□□□□ 0.7
Sec61a2Q9JLR1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sec61a2Q9JLR1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sec61a2Q9JLR1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec61a2Q9JLR1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec61a2Q9JLR1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sec61a2Q9JLR1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sec61a2Q9JLR1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec61a2Q9JLR1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.4■□□□□ 0.7
Sec61a2Q9JLR1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sec61a2Q9JLR1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sec61a2Q9JLR1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a2Q9JLR1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sec61a2Q9JLR1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sec61a2Q9JLR1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sec61a2Q9JLR1 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.37■□□□□ 0.69
Sec61a2Q9JLR1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sec61a2Q9JLR1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sec61a2Q9JLR1 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sec61a2Q9JLR1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sec61a2Q9JLR1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a2Q9JLR1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sec61a2Q9JLR1 Gm14523-201ENSMUST00000117260 558 ntBASIC19.36■□□□□ 0.69
Sec61a2Q9JLR1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a2Q9JLR1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a2Q9JLR1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a2Q9JLR1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sec61a2Q9JLR1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Sec61a2Q9JLR1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.35■□□□□ 0.69
Sec61a2Q9JLR1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec61a2Q9JLR1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sec61a2Q9JLR1 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Gm7332-201ENSMUST00000118351 454 ntBASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a2Q9JLR1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sec61a2Q9JLR1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms