Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp2Q9JJX7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tdp2Q9JJX7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
Tdp2Q9JJX7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tdp2Q9JJX7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tdp2Q9JJX7 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp2Q9JJX7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tdp2Q9JJX7 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tdp2Q9JJX7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Tdp2Q9JJX7 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.45■■□□□ 1.02
Tdp2Q9JJX7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Tdp2Q9JJX7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tdp2Q9JJX7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tdp2Q9JJX7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tdp2Q9JJX7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tdp2Q9JJX7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.44■■□□□ 1.02
Tdp2Q9JJX7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Tdp2Q9JJX7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tdp2Q9JJX7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tdp2Q9JJX7 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.41■■□□□ 1.02
Tdp2Q9JJX7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp2Q9JJX7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Tdp2Q9JJX7 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp2Q9JJX7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.4■■□□□ 1.02
Tdp2Q9JJX7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp2Q9JJX7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.4■■□□□ 1.02
Tdp2Q9JJX7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tdp2Q9JJX7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Tdp2Q9JJX7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Tdp2Q9JJX7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.39■■□□□ 1.01
Tdp2Q9JJX7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tdp2Q9JJX7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tdp2Q9JJX7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tdp2Q9JJX7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
Tdp2Q9JJX7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tdp2Q9JJX7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tdp2Q9JJX7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tdp2Q9JJX7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tdp2Q9JJX7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tdp2Q9JJX7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tdp2Q9JJX7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Tdp2Q9JJX7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tdp2Q9JJX7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tdp2Q9JJX7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tdp2Q9JJX7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.36■■□□□ 1.01
Tdp2Q9JJX7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.36■■□□□ 1.01
Tdp2Q9JJX7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tdp2Q9JJX7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tdp2Q9JJX7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Tdp2Q9JJX7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tdp2Q9JJX7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tdp2Q9JJX7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tdp2Q9JJX7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tdp2Q9JJX7 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.34■■□□□ 1.01
Tdp2Q9JJX7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.34■■□□□ 1.01
Tdp2Q9JJX7 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.34■■□□□ 1.01
Tdp2Q9JJX7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms