Protein–RNA interactions for Protein: Q9JIA1

Lgi1, Leucine-rich glioma-inactivated protein 1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi1Q9JIA1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.24■□□□□ 0.83
Lgi1Q9JIA1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.24■□□□□ 0.83
Lgi1Q9JIA1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgi1Q9JIA1 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lgi1Q9JIA1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lgi1Q9JIA1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lgi1Q9JIA1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lgi1Q9JIA1 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lgi1Q9JIA1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lgi1Q9JIA1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lgi1Q9JIA1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lgi1Q9JIA1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lgi1Q9JIA1 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lgi1Q9JIA1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lgi1Q9JIA1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lgi1Q9JIA1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lgi1Q9JIA1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
Lgi1Q9JIA1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lgi1Q9JIA1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Lgi1Q9JIA1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lgi1Q9JIA1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lgi1Q9JIA1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.19■□□□□ 0.82
Lgi1Q9JIA1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lgi1Q9JIA1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lgi1Q9JIA1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lgi1Q9JIA1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lgi1Q9JIA1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.18■□□□□ 0.82
Lgi1Q9JIA1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lgi1Q9JIA1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lgi1Q9JIA1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lgi1Q9JIA1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lgi1Q9JIA1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lgi1Q9JIA1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lgi1Q9JIA1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lgi1Q9JIA1 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lgi1Q9JIA1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lgi1Q9JIA1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lgi1Q9JIA1 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lgi1Q9JIA1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lgi1Q9JIA1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lgi1Q9JIA1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lgi1Q9JIA1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Lgi1Q9JIA1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.14■□□□□ 0.82
Lgi1Q9JIA1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lgi1Q9JIA1 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lgi1Q9JIA1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lgi1Q9JIA1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.14■□□□□ 0.81
Lgi1Q9JIA1 Gm22567-201ENSMUST00000175542 342 ntBASIC20.14■□□□□ 0.81
Lgi1Q9JIA1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lgi1Q9JIA1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lgi1Q9JIA1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lgi1Q9JIA1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lgi1Q9JIA1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lgi1Q9JIA1 Gm10420-201ENSMUST00000121713 882 ntBASIC20.13■□□□□ 0.81
Lgi1Q9JIA1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.13■□□□□ 0.81
Lgi1Q9JIA1 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lgi1Q9JIA1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Lgi1Q9JIA1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lgi1Q9JIA1 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.12■□□□□ 0.81
Lgi1Q9JIA1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lgi1Q9JIA1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lgi1Q9JIA1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Lgi1Q9JIA1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Lgi1Q9JIA1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lgi1Q9JIA1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lgi1Q9JIA1 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.11■□□□□ 0.81
Lgi1Q9JIA1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lgi1Q9JIA1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.11■□□□□ 0.81
Lgi1Q9JIA1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.1■□□□□ 0.81
Lgi1Q9JIA1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lgi1Q9JIA1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Lgi1Q9JIA1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lgi1Q9JIA1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lgi1Q9JIA1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Lgi1Q9JIA1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lgi1Q9JIA1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lgi1Q9JIA1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lgi1Q9JIA1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Lgi1Q9JIA1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Lgi1Q9JIA1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Lgi1Q9JIA1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms