Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps35Q9EQH3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps35Q9EQH3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Vps35Q9EQH3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps35Q9EQH3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps35Q9EQH3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps35Q9EQH3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.68■■□□□ 1.06
Vps35Q9EQH3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.68■■□□□ 1.06
Vps35Q9EQH3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vps35Q9EQH3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps35Q9EQH3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Vps35Q9EQH3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps35Q9EQH3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps35Q9EQH3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vps35Q9EQH3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps35Q9EQH3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps35Q9EQH3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps35Q9EQH3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps35Q9EQH3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Vps35Q9EQH3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Vps35Q9EQH3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.66■■□□□ 1.06
Vps35Q9EQH3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps35Q9EQH3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps35Q9EQH3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vps35Q9EQH3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps35Q9EQH3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vps35Q9EQH3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Vps35Q9EQH3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Vps35Q9EQH3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps35Q9EQH3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps35Q9EQH3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps35Q9EQH3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Vps35Q9EQH3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.63■■□□□ 1.05
Vps35Q9EQH3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps35Q9EQH3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vps35Q9EQH3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps35Q9EQH3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps35Q9EQH3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps35Q9EQH3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps35Q9EQH3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Vps35Q9EQH3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Vps35Q9EQH3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms