Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Echdc3Q9D7J9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Echdc3Q9D7J9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Echdc3Q9D7J9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Echdc3Q9D7J9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Echdc3Q9D7J9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Echdc3Q9D7J9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.04■□□□□ 0.96
Echdc3Q9D7J9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Echdc3Q9D7J9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Echdc3Q9D7J9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Echdc3Q9D7J9 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Echdc3Q9D7J9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.02■□□□□ 0.96
Echdc3Q9D7J9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Echdc3Q9D7J9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Echdc3Q9D7J9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.02■□□□□ 0.96
Echdc3Q9D7J9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Echdc3Q9D7J9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Echdc3Q9D7J9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Echdc3Q9D7J9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Echdc3Q9D7J9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21■□□□□ 0.95
Echdc3Q9D7J9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Echdc3Q9D7J9 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Echdc3Q9D7J9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Echdc3Q9D7J9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Echdc3Q9D7J9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Echdc3Q9D7J9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Echdc3Q9D7J9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Echdc3Q9D7J9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.98■□□□□ 0.95
Echdc3Q9D7J9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Echdc3Q9D7J9 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.98■□□□□ 0.95
Echdc3Q9D7J9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Echdc3Q9D7J9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Echdc3Q9D7J9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Echdc3Q9D7J9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Echdc3Q9D7J9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.97■□□□□ 0.95
Echdc3Q9D7J9 Mir3960-201ENSMUST00000198213 73 ntBASIC20.97■□□□□ 0.95
Echdc3Q9D7J9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Echdc3Q9D7J9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Echdc3Q9D7J9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.96■□□□□ 0.95
Echdc3Q9D7J9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Echdc3Q9D7J9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Echdc3Q9D7J9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Echdc3Q9D7J9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Gm9812-201ENSMUST00000061934 968 ntBASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Echdc3Q9D7J9 Gm45364-201ENSMUST00000210883 159 ntBASIC20.93■□□□□ 0.94
Echdc3Q9D7J9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Echdc3Q9D7J9 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.93■□□□□ 0.94
Echdc3Q9D7J9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Echdc3Q9D7J9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Echdc3Q9D7J9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Echdc3Q9D7J9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Echdc3Q9D7J9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
Echdc3Q9D7J9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.91■□□□□ 0.94
Echdc3Q9D7J9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Echdc3Q9D7J9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Echdc3Q9D7J9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Echdc3Q9D7J9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Echdc3Q9D7J9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Echdc3Q9D7J9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms