Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Snrnp48Q9D361 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Snrnp48Q9D361 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Snrnp48Q9D361 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Snrnp48Q9D361 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Snrnp48Q9D361 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Snrnp48Q9D361 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.7■■□□□ 1.06
Snrnp48Q9D361 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Snrnp48Q9D361 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Snrnp48Q9D361 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Snrnp48Q9D361 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Snrnp48Q9D361 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Snrnp48Q9D361 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Snrnp48Q9D361 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Snrnp48Q9D361 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Snrnp48Q9D361 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Snrnp48Q9D361 Gm10420-201ENSMUST00000121713 882 ntBASIC21.67■■□□□ 1.06
Snrnp48Q9D361 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Snrnp48Q9D361 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Snrnp48Q9D361 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Snrnp48Q9D361 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Snrnp48Q9D361 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Snrnp48Q9D361 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.66■■□□□ 1.06
Snrnp48Q9D361 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Snrnp48Q9D361 Cap2-205ENSMUST00000225824 1634 ntBASIC21.66■■□□□ 1.06
Snrnp48Q9D361 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Snrnp48Q9D361 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.65■■□□□ 1.06
Snrnp48Q9D361 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.65■■□□□ 1.06
Snrnp48Q9D361 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.65■■□□□ 1.06
Snrnp48Q9D361 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Snrnp48Q9D361 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Snrnp48Q9D361 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Snrnp48Q9D361 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Snrnp48Q9D361 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.64■■□□□ 1.05
Snrnp48Q9D361 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.64■■□□□ 1.05
Snrnp48Q9D361 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Snrnp48Q9D361 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Snrnp48Q9D361 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Snrnp48Q9D361 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.64■■□□□ 1.05
Snrnp48Q9D361 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.63■■□□□ 1.05
Snrnp48Q9D361 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Snrnp48Q9D361 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Snrnp48Q9D361 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Snrnp48Q9D361 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.6■■□□□ 1.05
Snrnp48Q9D361 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Snrnp48Q9D361 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Snrnp48Q9D361 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Snrnp48Q9D361 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.6■■□□□ 1.05
Snrnp48Q9D361 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Snrnp48Q9D361 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Snrnp48Q9D361 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.59■■□□□ 1.05
Snrnp48Q9D361 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Snrnp48Q9D361 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Snrnp48Q9D361 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Snrnp48Q9D361 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Snrnp48Q9D361 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Snrnp48Q9D361 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Snrnp48Q9D361 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms