Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrps28Q9CY16 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.59■□□□□ 0.73
Mrps28Q9CY16 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Mrps28Q9CY16 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.59■□□□□ 0.73
Mrps28Q9CY16 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrps28Q9CY16 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Mrps28Q9CY16 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mrps28Q9CY16 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Mrps28Q9CY16 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Mrps28Q9CY16 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.58■□□□□ 0.72
Mrps28Q9CY16 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mrps28Q9CY16 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mrps28Q9CY16 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mrps28Q9CY16 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Mrps28Q9CY16 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.58■□□□□ 0.72
Mrps28Q9CY16 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.57■□□□□ 0.72
Mrps28Q9CY16 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrps28Q9CY16 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mrps28Q9CY16 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mrps28Q9CY16 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Mrps28Q9CY16 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Gm10420-201ENSMUST00000121713 882 ntBASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Cap2-205ENSMUST00000225824 1634 ntBASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mrps28Q9CY16 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Mrps28Q9CY16 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrps28Q9CY16 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Mrps28Q9CY16 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Mrps28Q9CY16 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrps28Q9CY16 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Mrps28Q9CY16 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mrps28Q9CY16 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mrps28Q9CY16 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mrps28Q9CY16 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mrps28Q9CY16 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Mrps28Q9CY16 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrps28Q9CY16 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrps28Q9CY16 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mrps28Q9CY16 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Mrps28Q9CY16 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mrps28Q9CY16 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Mrps28Q9CY16 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mrps28Q9CY16 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mrps28Q9CY16 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.49■□□□□ 0.71
Mrps28Q9CY16 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
Mrps28Q9CY16 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrps28Q9CY16 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrps28Q9CY16 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrps28Q9CY16 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrps28Q9CY16 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mrps28Q9CY16 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mrps28Q9CY16 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrps28Q9CY16 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrps28Q9CY16 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mrps28Q9CY16 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrps28Q9CY16 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.47■□□□□ 0.71
Mrps28Q9CY16 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrps28Q9CY16 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Mrps28Q9CY16 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.46■□□□□ 0.71
Mrps28Q9CY16 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Mrps28Q9CY16 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms