Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim8Q99PJ2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim8Q99PJ2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim8Q99PJ2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim8Q99PJ2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim8Q99PJ2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 Gm7432-201ENSMUST00000210343 879 ntBASIC21.19■□□□□ 0.98
Trim8Q99PJ2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim8Q99PJ2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Trim8Q99PJ2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim8Q99PJ2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim8Q99PJ2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim8Q99PJ2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim8Q99PJ2 Terc-201ENSMUST00000082862 423 ntBASIC21.15■□□□□ 0.98
Trim8Q99PJ2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim8Q99PJ2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim8Q99PJ2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim8Q99PJ2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Trim8Q99PJ2 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.14■□□□□ 0.98
Trim8Q99PJ2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.14■□□□□ 0.98
Trim8Q99PJ2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim8Q99PJ2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim8Q99PJ2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Trim8Q99PJ2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim8Q99PJ2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim8Q99PJ2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim8Q99PJ2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim8Q99PJ2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim8Q99PJ2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim8Q99PJ2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
Trim8Q99PJ2 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim8Q99PJ2 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim8Q99PJ2 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.12■□□□□ 0.97
Trim8Q99PJ2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim8Q99PJ2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim8Q99PJ2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim8Q99PJ2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim8Q99PJ2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim8Q99PJ2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim8Q99PJ2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim8Q99PJ2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim8Q99PJ2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim8Q99PJ2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim8Q99PJ2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim8Q99PJ2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim8Q99PJ2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim8Q99PJ2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim8Q99PJ2 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.09■□□□□ 0.97
Trim8Q99PJ2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim8Q99PJ2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim8Q99PJ2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim8Q99PJ2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.08■□□□□ 0.97
Trim8Q99PJ2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim8Q99PJ2 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim8Q99PJ2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Trim8Q99PJ2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim8Q99PJ2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim8Q99PJ2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.07■□□□□ 0.96
Trim8Q99PJ2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim8Q99PJ2 Gm11599-201ENSMUST00000118720 878 ntBASIC21.07■□□□□ 0.96
Trim8Q99PJ2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.07■□□□□ 0.96
Trim8Q99PJ2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim8Q99PJ2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim8Q99PJ2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms