Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rQ99PI8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rQ99PI8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rQ99PI8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4rQ99PI8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rQ99PI8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rQ99PI8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rQ99PI8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.16■□□□□ 0.66
Rtn4rQ99PI8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.16■□□□□ 0.66
Rtn4rQ99PI8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rQ99PI8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rtn4rQ99PI8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4rQ99PI8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.15■□□□□ 0.66
Rtn4rQ99PI8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4rQ99PI8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4rQ99PI8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rtn4rQ99PI8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rtn4rQ99PI8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rtn4rQ99PI8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Rtn4rQ99PI8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4rQ99PI8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4rQ99PI8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4rQ99PI8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4rQ99PI8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rtn4rQ99PI8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rtn4rQ99PI8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn4rQ99PI8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.12■□□□□ 0.65
Rtn4rQ99PI8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn4rQ99PI8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn4rQ99PI8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rtn4rQ99PI8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rtn4rQ99PI8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.11■□□□□ 0.65
Rtn4rQ99PI8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.11■□□□□ 0.65
Rtn4rQ99PI8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.11■□□□□ 0.65
Rtn4rQ99PI8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn4rQ99PI8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn4rQ99PI8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rtn4rQ99PI8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn4rQ99PI8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn4rQ99PI8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.1■□□□□ 0.65
Rtn4rQ99PI8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn4rQ99PI8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rtn4rQ99PI8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.1■□□□□ 0.65
Rtn4rQ99PI8 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4rQ99PI8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Rtn4rQ99PI8 Gm5921-201ENSMUST00000075898 882 ntBASIC19.09■□□□□ 0.65
Rtn4rQ99PI8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4rQ99PI8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4rQ99PI8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Rtn4rQ99PI8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rtn4rQ99PI8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Rtn4rQ99PI8 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.08■□□□□ 0.64
Rtn4rQ99PI8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4rQ99PI8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rtn4rQ99PI8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rtn4rQ99PI8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rtn4rQ99PI8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms