Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.06■□□□□ 0.96
Rnf111Q99ML9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf111Q99ML9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
Rnf111Q99ML9 Scarna2-201ENSMUST00000157560 414 ntBASIC21.06■□□□□ 0.96
Rnf111Q99ML9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rnf111Q99ML9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf111Q99ML9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf111Q99ML9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf111Q99ML9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf111Q99ML9 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rnf111Q99ML9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf111Q99ML9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rnf111Q99ML9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf111Q99ML9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf111Q99ML9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf111Q99ML9 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf111Q99ML9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Rnf111Q99ML9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rnf111Q99ML9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf111Q99ML9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rnf111Q99ML9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf111Q99ML9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf111Q99ML9 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf111Q99ML9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rnf111Q99ML9 Gm9806-201ENSMUST00000051080 552 ntBASIC21.02■□□□□ 0.96
Rnf111Q99ML9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rnf111Q99ML9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf111Q99ML9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.01■□□□□ 0.95
Rnf111Q99ML9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf111Q99ML9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Rnf111Q99ML9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rnf111Q99ML9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf111Q99ML9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rnf111Q99ML9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rnf111Q99ML9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rnf111Q99ML9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Rnf111Q99ML9 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Gm16437-201ENSMUST00000025669 507 ntBASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.99■□□□□ 0.95
Rnf111Q99ML9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf111Q99ML9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf111Q99ML9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf111Q99ML9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf111Q99ML9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf111Q99ML9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Rnf111Q99ML9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf111Q99ML9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf111Q99ML9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf111Q99ML9 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf111Q99ML9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.95■□□□□ 0.94
Rnf111Q99ML9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rnf111Q99ML9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.95■□□□□ 0.94
Rnf111Q99ML9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf111Q99ML9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf111Q99ML9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf111Q99ML9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.94■□□□□ 0.94
Rnf111Q99ML9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf111Q99ML9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf111Q99ML9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf111Q99ML9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Rnf111Q99ML9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf111Q99ML9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf111Q99ML9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
Rnf111Q99ML9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf111Q99ML9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Rnf111Q99ML9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
Rnf111Q99ML9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf111Q99ML9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rnf111Q99ML9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms