Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb20Q91XZ9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 Gm13238-201ENSMUST00000117655 780 ntBASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.86■□□□□ 0.93
Pcdhb20Q91XZ9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb20Q91XZ9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb20Q91XZ9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb20Q91XZ9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb20Q91XZ9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb20Q91XZ9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb20Q91XZ9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb20Q91XZ9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhb20Q91XZ9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb20Q91XZ9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb20Q91XZ9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb20Q91XZ9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pcdhb20Q91XZ9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdhb20Q91XZ9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb20Q91XZ9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb20Q91XZ9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb20Q91XZ9 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb20Q91XZ9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb20Q91XZ9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb20Q91XZ9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb20Q91XZ9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb20Q91XZ9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb20Q91XZ9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb20Q91XZ9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb20Q91XZ9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb20Q91XZ9 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Pcdhb20Q91XZ9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb20Q91XZ9 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.79■□□□□ 0.92
Pcdhb20Q91XZ9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb20Q91XZ9 Gm22567-201ENSMUST00000175542 342 ntBASIC20.79■□□□□ 0.92
Pcdhb20Q91XZ9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
Pcdhb20Q91XZ9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.79■□□□□ 0.92
Pcdhb20Q91XZ9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb20Q91XZ9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb20Q91XZ9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhb20Q91XZ9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb20Q91XZ9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb20Q91XZ9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 Gm15546-201ENSMUST00000122095 826 ntBASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Pcdhb20Q91XZ9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pcdhb20Q91XZ9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb20Q91XZ9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Pcdhb20Q91XZ9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdhb20Q91XZ9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb20Q91XZ9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb20Q91XZ9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb20Q91XZ9 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.75■□□□□ 0.91
Pcdhb20Q91XZ9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb20Q91XZ9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb20Q91XZ9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb20Q91XZ9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.74■□□□□ 0.91
Pcdhb20Q91XZ9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb20Q91XZ9 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb20Q91XZ9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms