Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb3Q91XZ7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb3Q91XZ7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.58■■□□□ 1.05
Pcdhb3Q91XZ7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb3Q91XZ7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb3Q91XZ7 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.58■■□□□ 1.04
Pcdhb3Q91XZ7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb3Q91XZ7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pcdhb3Q91XZ7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhb3Q91XZ7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb3Q91XZ7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb3Q91XZ7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb3Q91XZ7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb3Q91XZ7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhb3Q91XZ7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.56■■□□□ 1.04
Pcdhb3Q91XZ7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb3Q91XZ7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb3Q91XZ7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb3Q91XZ7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhb3Q91XZ7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb3Q91XZ7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb3Q91XZ7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb3Q91XZ7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb3Q91XZ7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.55■■□□□ 1.04
Pcdhb3Q91XZ7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.54■■□□□ 1.04
Pcdhb3Q91XZ7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb3Q91XZ7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb3Q91XZ7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
Pcdhb3Q91XZ7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhb3Q91XZ7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Pcdhb3Q91XZ7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhb3Q91XZ7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb3Q91XZ7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb3Q91XZ7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb3Q91XZ7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdhb3Q91XZ7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhb3Q91XZ7 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.53■■□□□ 1.04
Pcdhb3Q91XZ7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb3Q91XZ7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb3Q91XZ7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhb3Q91XZ7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhb3Q91XZ7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb3Q91XZ7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Pcdhb3Q91XZ7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb3Q91XZ7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb3Q91XZ7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhb3Q91XZ7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhb3Q91XZ7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhb3Q91XZ7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb3Q91XZ7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb3Q91XZ7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhb3Q91XZ7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb3Q91XZ7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb3Q91XZ7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb3Q91XZ7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhb3Q91XZ7 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.48■■□□□ 1.03
Pcdhb3Q91XZ7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb3Q91XZ7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb3Q91XZ7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Pcdhb3Q91XZ7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb3Q91XZ7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb3Q91XZ7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Pcdhb3Q91XZ7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhb3Q91XZ7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb3Q91XZ7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb3Q91XZ7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb3Q91XZ7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhb3Q91XZ7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdhb3Q91XZ7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhb3Q91XZ7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhb3Q91XZ7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms