Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhga6Q91XY2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhga6Q91XY2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Pcdhga6Q91XY2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga6Q91XY2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga6Q91XY2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Pcdhga6Q91XY2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Pcdhga6Q91XY2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Pcdhga6Q91XY2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga6Q91XY2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga6Q91XY2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga6Q91XY2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdhga6Q91XY2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.47■■□□□ 1.03
Pcdhga6Q91XY2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Pcdhga6Q91XY2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdhga6Q91XY2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdhga6Q91XY2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.43■■□□□ 1.02
Pcdhga6Q91XY2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga6Q91XY2 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.42■■□□□ 1.02
Pcdhga6Q91XY2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga6Q91XY2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga6Q91XY2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga6Q91XY2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdhga6Q91XY2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga6Q91XY2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.41■■□□□ 1.02
Pcdhga6Q91XY2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcdhga6Q91XY2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcdhga6Q91XY2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdhga6Q91XY2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga6Q91XY2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.4■■□□□ 1.02
Pcdhga6Q91XY2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga6Q91XY2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga6Q91XY2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdhga6Q91XY2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga6Q91XY2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdhga6Q91XY2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga6Q91XY2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.39■■□□□ 1.02
Pcdhga6Q91XY2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga6Q91XY2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga6Q91XY2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga6Q91XY2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga6Q91XY2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga6Q91XY2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms