Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh18Q8VHR0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh18Q8VHR0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh18Q8VHR0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh18Q8VHR0 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdh18Q8VHR0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Pcdh18Q8VHR0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh18Q8VHR0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh18Q8VHR0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh18Q8VHR0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pcdh18Q8VHR0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh18Q8VHR0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh18Q8VHR0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdh18Q8VHR0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh18Q8VHR0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdh18Q8VHR0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.78■□□□□ 0.92
Pcdh18Q8VHR0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.78■□□□□ 0.92
Pcdh18Q8VHR0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdh18Q8VHR0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Gm4799-201ENSMUST00000095396 657 ntBASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Pcdh18Q8VHR0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pcdh18Q8VHR0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Gm7432-201ENSMUST00000210343 879 ntBASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdh18Q8VHR0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh18Q8VHR0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh18Q8VHR0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh18Q8VHR0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh18Q8VHR0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh18Q8VHR0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdh18Q8VHR0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Pcdh18Q8VHR0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.72■□□□□ 0.91
Pcdh18Q8VHR0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pcdh18Q8VHR0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh18Q8VHR0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdh18Q8VHR0 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.72■□□□□ 0.91
Pcdh18Q8VHR0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh18Q8VHR0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh18Q8VHR0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh18Q8VHR0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.71■□□□□ 0.91
Pcdh18Q8VHR0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdh18Q8VHR0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pcdh18Q8VHR0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdh18Q8VHR0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh18Q8VHR0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh18Q8VHR0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdh18Q8VHR0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh18Q8VHR0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh18Q8VHR0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdh18Q8VHR0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdh18Q8VHR0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdh18Q8VHR0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdh18Q8VHR0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms