Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkd2Q8VE28 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nkd2Q8VE28 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nkd2Q8VE28 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Gm15546-201ENSMUST00000122095 826 ntBASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nkd2Q8VE28 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd2Q8VE28 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd2Q8VE28 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nkd2Q8VE28 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd2Q8VE28 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nkd2Q8VE28 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkd2Q8VE28 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkd2Q8VE28 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nkd2Q8VE28 Gm22567-201ENSMUST00000175542 342 ntBASIC19.68■□□□□ 0.74
Nkd2Q8VE28 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nkd2Q8VE28 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkd2Q8VE28 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd2Q8VE28 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd2Q8VE28 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd2Q8VE28 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkd2Q8VE28 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Nkd2Q8VE28 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd2Q8VE28 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkd2Q8VE28 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Nkd2Q8VE28 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkd2Q8VE28 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkd2Q8VE28 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkd2Q8VE28 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.64■□□□□ 0.73
Nkd2Q8VE28 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nkd2Q8VE28 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkd2Q8VE28 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nkd2Q8VE28 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd2Q8VE28 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd2Q8VE28 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Nkd2Q8VE28 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkd2Q8VE28 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkd2Q8VE28 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd2Q8VE28 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkd2Q8VE28 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.61■□□□□ 0.73
Nkd2Q8VE28 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd2Q8VE28 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkd2Q8VE28 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd2Q8VE28 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd2Q8VE28 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.6■□□□□ 0.73
Nkd2Q8VE28 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd2Q8VE28 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd2Q8VE28 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd2Q8VE28 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd2Q8VE28 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd2Q8VE28 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms