Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Ddx39aQ8VDW0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx39aQ8VDW0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx39aQ8VDW0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx39aQ8VDW0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Ddx39aQ8VDW0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ddx39aQ8VDW0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Ddx39aQ8VDW0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ddx39aQ8VDW0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.27■■□□□ 1.48
Ddx39aQ8VDW0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx39aQ8VDW0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx39aQ8VDW0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx39aQ8VDW0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Ddx39aQ8VDW0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx39aQ8VDW0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ddx39aQ8VDW0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx39aQ8VDW0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.26■■□□□ 1.47
Ddx39aQ8VDW0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.26■■□□□ 1.47
Ddx39aQ8VDW0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx39aQ8VDW0 Gm9959-201ENSMUST00000068277 390 ntBASIC24.26■■□□□ 1.47
Ddx39aQ8VDW0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.26■■□□□ 1.47
Ddx39aQ8VDW0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ddx39aQ8VDW0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx39aQ8VDW0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Ddx39aQ8VDW0 Gm45102-201ENSMUST00000207427 857 ntBASIC24.25■■□□□ 1.47
Ddx39aQ8VDW0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ddx39aQ8VDW0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC24.24■■□□□ 1.47
Ddx39aQ8VDW0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx39aQ8VDW0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx39aQ8VDW0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ddx39aQ8VDW0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx39aQ8VDW0 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx39aQ8VDW0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx39aQ8VDW0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx39aQ8VDW0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ddx39aQ8VDW0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Ddx39aQ8VDW0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx39aQ8VDW0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx39aQ8VDW0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx39aQ8VDW0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx39aQ8VDW0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx39aQ8VDW0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ddx39aQ8VDW0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
Ddx39aQ8VDW0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx39aQ8VDW0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.2■■□□□ 1.46
Ddx39aQ8VDW0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ddx39aQ8VDW0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx39aQ8VDW0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx39aQ8VDW0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx39aQ8VDW0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ddx39aQ8VDW0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx39aQ8VDW0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx39aQ8VDW0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ddx39aQ8VDW0 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx39aQ8VDW0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx39aQ8VDW0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx39aQ8VDW0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ddx39aQ8VDW0 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ddx39aQ8VDW0 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.16■■□□□ 1.46
Ddx39aQ8VDW0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC24.16■■□□□ 1.46
Ddx39aQ8VDW0 Gm28731-201ENSMUST00000185564 1569 ntBASIC24.16■■□□□ 1.46
Ddx39aQ8VDW0 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.16■■□□□ 1.46
Ddx39aQ8VDW0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ddx39aQ8VDW0 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.15■■□□□ 1.46
Ddx39aQ8VDW0 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.15■■□□□ 1.46
Ddx39aQ8VDW0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Ddx39aQ8VDW0 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
Ddx39aQ8VDW0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC24.14■■□□□ 1.46
Ddx39aQ8VDW0 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.14■■□□□ 1.46
Ddx39aQ8VDW0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.14■■□□□ 1.45
Ddx39aQ8VDW0 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx39aQ8VDW0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx39aQ8VDW0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ddx39aQ8VDW0 Etf1-202ENSMUST00000180351 108 ntBASIC24.13■■□□□ 1.45
Ddx39aQ8VDW0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.12■■□□□ 1.45
Ddx39aQ8VDW0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx39aQ8VDW0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx39aQ8VDW0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ddx39aQ8VDW0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
Ddx39aQ8VDW0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.12■■□□□ 1.45
Ddx39aQ8VDW0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.12■■□□□ 1.45
Ddx39aQ8VDW0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx39aQ8VDW0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx39aQ8VDW0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx39aQ8VDW0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx39aQ8VDW0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Ddx39aQ8VDW0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx39aQ8VDW0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ddx39aQ8VDW0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx39aQ8VDW0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ddx39aQ8VDW0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.1■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms