Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf8Q8VC56 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Rnf8Q8VC56 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf8Q8VC56 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf8Q8VC56 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf8Q8VC56 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf8Q8VC56 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.82■□□□□ 0.92
Rnf8Q8VC56 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf8Q8VC56 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf8Q8VC56 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf8Q8VC56 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.82■□□□□ 0.92
Rnf8Q8VC56 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf8Q8VC56 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rnf8Q8VC56 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf8Q8VC56 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf8Q8VC56 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rnf8Q8VC56 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf8Q8VC56 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf8Q8VC56 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf8Q8VC56 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf8Q8VC56 Gm16437-201ENSMUST00000025669 507 ntBASIC20.8■□□□□ 0.92
Rnf8Q8VC56 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf8Q8VC56 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.8■□□□□ 0.92
Rnf8Q8VC56 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf8Q8VC56 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rnf8Q8VC56 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf8Q8VC56 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf8Q8VC56 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf8Q8VC56 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf8Q8VC56 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf8Q8VC56 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf8Q8VC56 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf8Q8VC56 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf8Q8VC56 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rnf8Q8VC56 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.78■□□□□ 0.92
Rnf8Q8VC56 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf8Q8VC56 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf8Q8VC56 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf8Q8VC56 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Rnf8Q8VC56 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rnf8Q8VC56 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf8Q8VC56 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf8Q8VC56 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf8Q8VC56 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf8Q8VC56 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.76■□□□□ 0.91
Rnf8Q8VC56 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.75■□□□□ 0.91
Rnf8Q8VC56 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.75■□□□□ 0.91
Rnf8Q8VC56 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf8Q8VC56 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf8Q8VC56 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf8Q8VC56 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf8Q8VC56 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf8Q8VC56 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rnf8Q8VC56 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf8Q8VC56 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf8Q8VC56 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.72■□□□□ 0.91
Rnf8Q8VC56 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf8Q8VC56 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf8Q8VC56 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf8Q8VC56 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf8Q8VC56 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf8Q8VC56 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.71■□□□□ 0.91
Rnf8Q8VC56 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf8Q8VC56 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
Rnf8Q8VC56 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf8Q8VC56 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.71■□□□□ 0.91
Rnf8Q8VC56 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.7■□□□□ 0.9
Rnf8Q8VC56 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf8Q8VC56 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.7■□□□□ 0.9
Rnf8Q8VC56 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf8Q8VC56 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rnf8Q8VC56 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf8Q8VC56 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf8Q8VC56 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rnf8Q8VC56 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rnf8Q8VC56 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rnf8Q8VC56 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms