Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Chrna3Q8R4G9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Chrna3Q8R4G9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Gm45444-201ENSMUST00000211394 898 ntBASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Chrna3Q8R4G9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna3Q8R4G9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna3Q8R4G9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna3Q8R4G9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Chrna3Q8R4G9 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Chrna3Q8R4G9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chrna3Q8R4G9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Chrna3Q8R4G9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.33■■□□□ 1
Chrna3Q8R4G9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chrna3Q8R4G9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Chrna3Q8R4G9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.32■■□□□ 1
Chrna3Q8R4G9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna3Q8R4G9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna3Q8R4G9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna3Q8R4G9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.32■■□□□ 1
Chrna3Q8R4G9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.32■■□□□ 1
Chrna3Q8R4G9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna3Q8R4G9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chrna3Q8R4G9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chrna3Q8R4G9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chrna3Q8R4G9 Gm13238-201ENSMUST00000117655 780 ntBASIC21.31■■□□□ 1
Chrna3Q8R4G9 Gm43566-201ENSMUST00000196851 808 ntBASIC21.31■■□□□ 1
Chrna3Q8R4G9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chrna3Q8R4G9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Chrna3Q8R4G9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Chrna3Q8R4G9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.3■■□□□ 1
Chrna3Q8R4G9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Chrna3Q8R4G9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Chrna3Q8R4G9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Chrna3Q8R4G9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chrna3Q8R4G9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Chrna3Q8R4G9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chrna3Q8R4G9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chrna3Q8R4G9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chrna3Q8R4G9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chrna3Q8R4G9 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Chrna3Q8R4G9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.29■■□□□ 1
Chrna3Q8R4G9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.28■■□□□ 1
Chrna3Q8R4G9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.28■■□□□ 1
Chrna3Q8R4G9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chrna3Q8R4G9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Chrna3Q8R4G9 Gm5812-201ENSMUST00000061073 957 ntBASIC21.28■■□□□ 1
Chrna3Q8R4G9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Chrna3Q8R4G9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chrna3Q8R4G9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Chrna3Q8R4G9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Chrna3Q8R4G9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.27■■□□□ 1
Chrna3Q8R4G9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Chrna3Q8R4G9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chrna3Q8R4G9 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Chrna3Q8R4G9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chrna3Q8R4G9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna3Q8R4G9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Chrna3Q8R4G9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Chrna3Q8R4G9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.26■□□□□ 0.99
Chrna3Q8R4G9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chrna3Q8R4G9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Chrna3Q8R4G9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna3Q8R4G9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.25■□□□□ 0.99
Chrna3Q8R4G9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.25■□□□□ 0.99
Chrna3Q8R4G9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Chrna3Q8R4G9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna3Q8R4G9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna3Q8R4G9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna3Q8R4G9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna3Q8R4G9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna3Q8R4G9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna3Q8R4G9 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna3Q8R4G9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna3Q8R4G9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna3Q8R4G9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
Chrna3Q8R4G9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.23■□□□□ 0.99
Chrna3Q8R4G9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna3Q8R4G9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Chrna3Q8R4G9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
Chrna3Q8R4G9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.22■□□□□ 0.99
Chrna3Q8R4G9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chrna3Q8R4G9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms