Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Cnot6Q8K3P5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot6Q8K3P5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.2■□□□□ 0.98
Cnot6Q8K3P5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot6Q8K3P5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot6Q8K3P5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot6Q8K3P5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cnot6Q8K3P5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Gm6311-201ENSMUST00000073790 878 ntBASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cnot6Q8K3P5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cnot6Q8K3P5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cnot6Q8K3P5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cnot6Q8K3P5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Cnot6Q8K3P5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Cnot6Q8K3P5 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.17■□□□□ 0.98
Cnot6Q8K3P5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot6Q8K3P5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cnot6Q8K3P5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cnot6Q8K3P5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot6Q8K3P5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.16■□□□□ 0.98
Cnot6Q8K3P5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot6Q8K3P5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cnot6Q8K3P5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cnot6Q8K3P5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cnot6Q8K3P5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Cnot6Q8K3P5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cnot6Q8K3P5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cnot6Q8K3P5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cnot6Q8K3P5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cnot6Q8K3P5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cnot6Q8K3P5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cnot6Q8K3P5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cnot6Q8K3P5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cnot6Q8K3P5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cnot6Q8K3P5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cnot6Q8K3P5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cnot6Q8K3P5 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cnot6Q8K3P5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cnot6Q8K3P5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cnot6Q8K3P5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
Cnot6Q8K3P5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cnot6Q8K3P5 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.08■□□□□ 0.96
Cnot6Q8K3P5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cnot6Q8K3P5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.07■□□□□ 0.96
Cnot6Q8K3P5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Cnot6Q8K3P5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms