Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Gm9847-201ENSMUST00000052528 599 ntBASIC21.88■■□□□ 1.09
Scara5Q8K299 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scara5Q8K299 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scara5Q8K299 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.87■■□□□ 1.09
Scara5Q8K299 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scara5Q8K299 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.87■■□□□ 1.09
Scara5Q8K299 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.87■■□□□ 1.09
Scara5Q8K299 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scara5Q8K299 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scara5Q8K299 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scara5Q8K299 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.85■■□□□ 1.09
Scara5Q8K299 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scara5Q8K299 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Scara5Q8K299 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scara5Q8K299 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scara5Q8K299 Gm21956-201ENSMUST00000179946 522 ntBASIC21.84■■□□□ 1.09
Scara5Q8K299 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scara5Q8K299 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Scara5Q8K299 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scara5Q8K299 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scara5Q8K299 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Scara5Q8K299 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scara5Q8K299 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scara5Q8K299 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scara5Q8K299 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scara5Q8K299 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.83■■□□□ 1.09
Scara5Q8K299 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Scara5Q8K299 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Scara5Q8K299 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.08
Scara5Q8K299 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scara5Q8K299 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scara5Q8K299 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scara5Q8K299 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Scara5Q8K299 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scara5Q8K299 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scara5Q8K299 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.81■■□□□ 1.08
Scara5Q8K299 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scara5Q8K299 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Scara5Q8K299 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Scara5Q8K299 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scara5Q8K299 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scara5Q8K299 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scara5Q8K299 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scara5Q8K299 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Scara5Q8K299 Gm22238-201ENSMUST00000175222 88 ntBASIC21.8■■□□□ 1.08
Scara5Q8K299 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.8■■□□□ 1.08
Scara5Q8K299 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scara5Q8K299 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Scara5Q8K299 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Scara5Q8K299 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scara5Q8K299 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Scara5Q8K299 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scara5Q8K299 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.78■■□□□ 1.08
Scara5Q8K299 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.78■■□□□ 1.08
Scara5Q8K299 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.78■■□□□ 1.08
Scara5Q8K299 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.78■■□□□ 1.08
Scara5Q8K299 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scara5Q8K299 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Scara5Q8K299 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scara5Q8K299 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scara5Q8K299 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scara5Q8K299 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.77■■□□□ 1.08
Scara5Q8K299 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.77■■□□□ 1.08
Scara5Q8K299 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.76■■□□□ 1.07
Scara5Q8K299 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.76■■□□□ 1.07
Scara5Q8K299 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scara5Q8K299 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scara5Q8K299 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scara5Q8K299 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scara5Q8K299 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scara5Q8K299 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scara5Q8K299 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Scara5Q8K299 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scara5Q8K299 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scara5Q8K299 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scara5Q8K299 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.74■■□□□ 1.07
Scara5Q8K299 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scara5Q8K299 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scara5Q8K299 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scara5Q8K299 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scara5Q8K299 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scara5Q8K299 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scara5Q8K299 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scara5Q8K299 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.73■■□□□ 1.07
Scara5Q8K299 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scara5Q8K299 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scara5Q8K299 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scara5Q8K299 Gm40881-201ENSMUST00000223397 166 ntBASIC21.72■■□□□ 1.07
Scara5Q8K299 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.72■■□□□ 1.07
Scara5Q8K299 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.72■■□□□ 1.07
Scara5Q8K299 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Scara5Q8K299 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scara5Q8K299 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scara5Q8K299 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Scara5Q8K299 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.71■■□□□ 1.07
Scara5Q8K299 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scara5Q8K299 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scara5Q8K299 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scara5Q8K299 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Scara5Q8K299 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms