Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rdh1Q8CGV4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh1Q8CGV4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh1Q8CGV4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh1Q8CGV4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.26■□□□□ 0.99
Rdh1Q8CGV4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rdh1Q8CGV4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Rdh1Q8CGV4 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rdh1Q8CGV4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rdh1Q8CGV4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.25■□□□□ 0.99
Rdh1Q8CGV4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rdh1Q8CGV4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh1Q8CGV4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh1Q8CGV4 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.24■□□□□ 0.99
Rdh1Q8CGV4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.24■□□□□ 0.99
Rdh1Q8CGV4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rdh1Q8CGV4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh1Q8CGV4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh1Q8CGV4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh1Q8CGV4 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh1Q8CGV4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh1Q8CGV4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rdh1Q8CGV4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rdh1Q8CGV4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rdh1Q8CGV4 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rdh1Q8CGV4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh1Q8CGV4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh1Q8CGV4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rdh1Q8CGV4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.2■□□□□ 0.98
Rdh1Q8CGV4 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.2■□□□□ 0.98
Rdh1Q8CGV4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rdh1Q8CGV4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rdh1Q8CGV4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Rdh1Q8CGV4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Rdh1Q8CGV4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Gm10232-201ENSMUST00000089221 720 ntBASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rdh1Q8CGV4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rdh1Q8CGV4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Rdh1Q8CGV4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rdh1Q8CGV4 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.16■□□□□ 0.98
Rdh1Q8CGV4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rdh1Q8CGV4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Rdh1Q8CGV4 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh1Q8CGV4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh1Q8CGV4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh1Q8CGV4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rdh1Q8CGV4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Rdh1Q8CGV4 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh1Q8CGV4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh1Q8CGV4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh1Q8CGV4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.14■□□□□ 0.97
Rdh1Q8CGV4 Rps24-207ENSMUST00000224568 714 ntBASIC21.14■□□□□ 0.97
Rdh1Q8CGV4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rdh1Q8CGV4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rdh1Q8CGV4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Gm22567-201ENSMUST00000175542 342 ntBASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.13■□□□□ 0.97
Rdh1Q8CGV4 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rdh1Q8CGV4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms