Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim4Q8C1Q6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim4Q8C1Q6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim4Q8C1Q6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim4Q8C1Q6 Gm22567-201ENSMUST00000175542 342 ntBASIC18.17■□□□□ 0.5
Smim4Q8C1Q6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim4Q8C1Q6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim4Q8C1Q6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim4Q8C1Q6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim4Q8C1Q6 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.15■□□□□ 0.5
Smim4Q8C1Q6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim4Q8C1Q6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smim4Q8C1Q6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smim4Q8C1Q6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smim4Q8C1Q6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Gm6311-201ENSMUST00000073790 878 ntBASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smim4Q8C1Q6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.12■□□□□ 0.49
Smim4Q8C1Q6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smim4Q8C1Q6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim4Q8C1Q6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim4Q8C1Q6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smim4Q8C1Q6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.11■□□□□ 0.49
Smim4Q8C1Q6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smim4Q8C1Q6 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim4Q8C1Q6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim4Q8C1Q6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim4Q8C1Q6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smim4Q8C1Q6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim4Q8C1Q6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim4Q8C1Q6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim4Q8C1Q6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.1■□□□□ 0.49
Smim4Q8C1Q6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim4Q8C1Q6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smim4Q8C1Q6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smim4Q8C1Q6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Smim4Q8C1Q6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smim4Q8C1Q6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smim4Q8C1Q6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Smim4Q8C1Q6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.08■□□□□ 0.48
Smim4Q8C1Q6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Smim4Q8C1Q6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Smim4Q8C1Q6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.07■□□□□ 0.48
Smim4Q8C1Q6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Smim4Q8C1Q6 Gm44428-201ENSMUST00000204474 874 ntBASIC18.07■□□□□ 0.48
Smim4Q8C1Q6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Smim4Q8C1Q6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Smim4Q8C1Q6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Smim4Q8C1Q6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
Smim4Q8C1Q6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Smim4Q8C1Q6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 831.3 ms