Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SprnQ8BWU1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.31■□□□□ 0.68
SprnQ8BWU1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SprnQ8BWU1 Gm11599-201ENSMUST00000118720 878 ntBASIC19.31■□□□□ 0.68
SprnQ8BWU1 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SprnQ8BWU1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SprnQ8BWU1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SprnQ8BWU1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SprnQ8BWU1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SprnQ8BWU1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SprnQ8BWU1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SprnQ8BWU1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SprnQ8BWU1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SprnQ8BWU1 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SprnQ8BWU1 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SprnQ8BWU1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SprnQ8BWU1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SprnQ8BWU1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SprnQ8BWU1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SprnQ8BWU1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SprnQ8BWU1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SprnQ8BWU1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
SprnQ8BWU1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SprnQ8BWU1 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.25■□□□□ 0.67
SprnQ8BWU1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SprnQ8BWU1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SprnQ8BWU1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SprnQ8BWU1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SprnQ8BWU1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SprnQ8BWU1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SprnQ8BWU1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SprnQ8BWU1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SprnQ8BWU1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SprnQ8BWU1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SprnQ8BWU1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SprnQ8BWU1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SprnQ8BWU1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
SprnQ8BWU1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.23■□□□□ 0.67
SprnQ8BWU1 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SprnQ8BWU1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SprnQ8BWU1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SprnQ8BWU1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SprnQ8BWU1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.21■□□□□ 0.67
SprnQ8BWU1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SprnQ8BWU1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SprnQ8BWU1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.2■□□□□ 0.66
SprnQ8BWU1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SprnQ8BWU1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SprnQ8BWU1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.2■□□□□ 0.66
SprnQ8BWU1 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SprnQ8BWU1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.19■□□□□ 0.66
SprnQ8BWU1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.19■□□□□ 0.66
SprnQ8BWU1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SprnQ8BWU1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SprnQ8BWU1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.18■□□□□ 0.66
SprnQ8BWU1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SprnQ8BWU1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SprnQ8BWU1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SprnQ8BWU1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SprnQ8BWU1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.17■□□□□ 0.66
SprnQ8BWU1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SprnQ8BWU1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.17■□□□□ 0.66
SprnQ8BWU1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SprnQ8BWU1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SprnQ8BWU1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SprnQ8BWU1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SprnQ8BWU1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SprnQ8BWU1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
SprnQ8BWU1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SprnQ8BWU1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms