Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trank1Q8BV79 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.28■□□□□ 0.68
Trank1Q8BV79 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trank1Q8BV79 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trank1Q8BV79 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trank1Q8BV79 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trank1Q8BV79 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.27■□□□□ 0.68
Trank1Q8BV79 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trank1Q8BV79 Gm12821-201ENSMUST00000120022 600 ntBASIC19.26■□□□□ 0.67
Trank1Q8BV79 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.26■□□□□ 0.67
Trank1Q8BV79 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.26■□□□□ 0.67
Trank1Q8BV79 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trank1Q8BV79 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trank1Q8BV79 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trank1Q8BV79 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trank1Q8BV79 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.25■□□□□ 0.67
Trank1Q8BV79 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trank1Q8BV79 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.25■□□□□ 0.67
Trank1Q8BV79 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trank1Q8BV79 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trank1Q8BV79 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trank1Q8BV79 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trank1Q8BV79 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trank1Q8BV79 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trank1Q8BV79 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.23■□□□□ 0.67
Trank1Q8BV79 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Trank1Q8BV79 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trank1Q8BV79 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trank1Q8BV79 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trank1Q8BV79 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trank1Q8BV79 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trank1Q8BV79 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trank1Q8BV79 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trank1Q8BV79 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.22■□□□□ 0.67
Trank1Q8BV79 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trank1Q8BV79 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trank1Q8BV79 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trank1Q8BV79 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trank1Q8BV79 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.21■□□□□ 0.67
Trank1Q8BV79 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trank1Q8BV79 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trank1Q8BV79 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trank1Q8BV79 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trank1Q8BV79 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trank1Q8BV79 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trank1Q8BV79 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trank1Q8BV79 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trank1Q8BV79 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trank1Q8BV79 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trank1Q8BV79 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trank1Q8BV79 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trank1Q8BV79 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trank1Q8BV79 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trank1Q8BV79 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trank1Q8BV79 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.19■□□□□ 0.66
Trank1Q8BV79 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.19■□□□□ 0.66
Trank1Q8BV79 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.19■□□□□ 0.66
Trank1Q8BV79 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trank1Q8BV79 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.18■□□□□ 0.66
Trank1Q8BV79 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trank1Q8BV79 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trank1Q8BV79 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trank1Q8BV79 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trank1Q8BV79 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trank1Q8BV79 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trank1Q8BV79 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trank1Q8BV79 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trank1Q8BV79 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trank1Q8BV79 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trank1Q8BV79 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
Trank1Q8BV79 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trank1Q8BV79 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
Trank1Q8BV79 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.15■□□□□ 0.66
Trank1Q8BV79 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trank1Q8BV79 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trank1Q8BV79 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trank1Q8BV79 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trank1Q8BV79 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.15■□□□□ 0.66
Trank1Q8BV79 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Trank1Q8BV79 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.14■□□□□ 0.66
Trank1Q8BV79 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.14■□□□□ 0.66
Trank1Q8BV79 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trank1Q8BV79 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Trank1Q8BV79 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Trank1Q8BV79 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trank1Q8BV79 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trank1Q8BV79 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trank1Q8BV79 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.14■□□□□ 0.65
Trank1Q8BV79 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trank1Q8BV79 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trank1Q8BV79 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Trank1Q8BV79 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms