Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap1Q8BTW8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.69■□□□□ 0.9
Cdk5rap1Q8BTW8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap1Q8BTW8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdk5rap1Q8BTW8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdk5rap1Q8BTW8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap1Q8BTW8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdk5rap1Q8BTW8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cdk5rap1Q8BTW8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk5rap1Q8BTW8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdk5rap1Q8BTW8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.67■□□□□ 0.9
Cdk5rap1Q8BTW8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdk5rap1Q8BTW8 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.65■□□□□ 0.9
Cdk5rap1Q8BTW8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.65■□□□□ 0.9
Cdk5rap1Q8BTW8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap1Q8BTW8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap1Q8BTW8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap1Q8BTW8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdk5rap1Q8BTW8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cdk5rap1Q8BTW8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdk5rap1Q8BTW8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Gm10232-201ENSMUST00000089221 720 ntBASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdk5rap1Q8BTW8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap1Q8BTW8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap1Q8BTW8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap1Q8BTW8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap1Q8BTW8 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.62■□□□□ 0.89
Cdk5rap1Q8BTW8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap1Q8BTW8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdk5rap1Q8BTW8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap1Q8BTW8 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.61■□□□□ 0.89
Cdk5rap1Q8BTW8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdk5rap1Q8BTW8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap1Q8BTW8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap1Q8BTW8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdk5rap1Q8BTW8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.6■□□□□ 0.89
Cdk5rap1Q8BTW8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cdk5rap1Q8BTW8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdk5rap1Q8BTW8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap1Q8BTW8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.58■□□□□ 0.89
Cdk5rap1Q8BTW8 Rps24-207ENSMUST00000224568 714 ntBASIC20.58■□□□□ 0.89
Cdk5rap1Q8BTW8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdk5rap1Q8BTW8 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap1Q8BTW8 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap1Q8BTW8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap1Q8BTW8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap1Q8BTW8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdk5rap1Q8BTW8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap1Q8BTW8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap1Q8BTW8 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cdk5rap1Q8BTW8 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cdk5rap1Q8BTW8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdk5rap1Q8BTW8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cdk5rap1Q8BTW8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdk5rap1Q8BTW8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.55■□□□□ 0.88
Cdk5rap1Q8BTW8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap1Q8BTW8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap1Q8BTW8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.55■□□□□ 0.88
Cdk5rap1Q8BTW8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap1Q8BTW8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdk5rap1Q8BTW8 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdk5rap1Q8BTW8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Gm22567-201ENSMUST00000175542 342 ntBASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.54■□□□□ 0.88
Cdk5rap1Q8BTW8 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms