Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf18Q8BM39 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf18Q8BM39 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf18Q8BM39 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Prpf18Q8BM39 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.55■□□□□ 0.88
Prpf18Q8BM39 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.55■□□□□ 0.88
Prpf18Q8BM39 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Prpf18Q8BM39 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf18Q8BM39 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Prpf18Q8BM39 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Prpf18Q8BM39 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.54■□□□□ 0.88
Prpf18Q8BM39 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Prpf18Q8BM39 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf18Q8BM39 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf18Q8BM39 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf18Q8BM39 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Prpf18Q8BM39 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Prpf18Q8BM39 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf18Q8BM39 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.52■□□□□ 0.87
Prpf18Q8BM39 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Prpf18Q8BM39 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Prpf18Q8BM39 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf18Q8BM39 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf18Q8BM39 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf18Q8BM39 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Prpf18Q8BM39 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.51■□□□□ 0.87
Prpf18Q8BM39 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf18Q8BM39 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf18Q8BM39 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf18Q8BM39 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Prpf18Q8BM39 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.5■□□□□ 0.87
Prpf18Q8BM39 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Prpf18Q8BM39 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Prpf18Q8BM39 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf18Q8BM39 Gm7432-201ENSMUST00000210343 879 ntBASIC20.49■□□□□ 0.87
Prpf18Q8BM39 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf18Q8BM39 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Prpf18Q8BM39 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Prpf18Q8BM39 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.48■□□□□ 0.87
Prpf18Q8BM39 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf18Q8BM39 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Prpf18Q8BM39 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Prpf18Q8BM39 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prpf18Q8BM39 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.46■□□□□ 0.87
Prpf18Q8BM39 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.46■□□□□ 0.87
Prpf18Q8BM39 Gm4799-201ENSMUST00000095396 657 ntBASIC20.46■□□□□ 0.87
Prpf18Q8BM39 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.45■□□□□ 0.87
Prpf18Q8BM39 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf18Q8BM39 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf18Q8BM39 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Prpf18Q8BM39 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prpf18Q8BM39 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf18Q8BM39 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf18Q8BM39 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf18Q8BM39 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prpf18Q8BM39 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prpf18Q8BM39 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf18Q8BM39 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf18Q8BM39 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf18Q8BM39 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf18Q8BM39 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf18Q8BM39 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf18Q8BM39 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prpf18Q8BM39 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Prpf18Q8BM39 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms