Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SynbQ8BI41 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SynbQ8BI41 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SynbQ8BI41 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SynbQ8BI41 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SynbQ8BI41 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.62■□□□□ 0.89
SynbQ8BI41 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SynbQ8BI41 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SynbQ8BI41 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SynbQ8BI41 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynbQ8BI41 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynbQ8BI41 Gm14117-201ENSMUST00000122417 843 ntBASIC20.61■□□□□ 0.89
SynbQ8BI41 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynbQ8BI41 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SynbQ8BI41 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynbQ8BI41 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynbQ8BI41 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SynbQ8BI41 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SynbQ8BI41 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SynbQ8BI41 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SynbQ8BI41 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SynbQ8BI41 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.59■□□□□ 0.89
SynbQ8BI41 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.58■□□□□ 0.89
SynbQ8BI41 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SynbQ8BI41 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.58■□□□□ 0.89
SynbQ8BI41 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SynbQ8BI41 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SynbQ8BI41 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SynbQ8BI41 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SynbQ8BI41 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.57■□□□□ 0.88
SynbQ8BI41 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SynbQ8BI41 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SynbQ8BI41 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynbQ8BI41 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SynbQ8BI41 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynbQ8BI41 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynbQ8BI41 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynbQ8BI41 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynbQ8BI41 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SynbQ8BI41 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SynbQ8BI41 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SynbQ8BI41 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SynbQ8BI41 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.55■□□□□ 0.88
SynbQ8BI41 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SynbQ8BI41 Gm9959-201ENSMUST00000068277 390 ntBASIC20.55■□□□□ 0.88
SynbQ8BI41 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.55■□□□□ 0.88
SynbQ8BI41 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SynbQ8BI41 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SynbQ8BI41 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SynbQ8BI41 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SynbQ8BI41 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SynbQ8BI41 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SynbQ8BI41 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SynbQ8BI41 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SynbQ8BI41 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SynbQ8BI41 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SynbQ8BI41 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SynbQ8BI41 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SynbQ8BI41 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.53■□□□□ 0.88
SynbQ8BI41 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.52■□□□□ 0.88
SynbQ8BI41 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.52■□□□□ 0.88
SynbQ8BI41 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SynbQ8BI41 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
SynbQ8BI41 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SynbQ8BI41 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SynbQ8BI41 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SynbQ8BI41 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SynbQ8BI41 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SynbQ8BI41 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SynbQ8BI41 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
SynbQ8BI41 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SynbQ8BI41 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.5■□□□□ 0.87
SynbQ8BI41 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SynbQ8BI41 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SynbQ8BI41 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SynbQ8BI41 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
SynbQ8BI41 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SynbQ8BI41 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SynbQ8BI41 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SynbQ8BI41 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SynbQ8BI41 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SynbQ8BI41 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SynbQ8BI41 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SynbQ8BI41 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SynbQ8BI41 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SynbQ8BI41 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SynbQ8BI41 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SynbQ8BI41 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SynbQ8BI41 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SynbQ8BI41 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SynbQ8BI41 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SynbQ8BI41 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SynbQ8BI41 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms