Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Prdm4Q80V63 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
Prdm4Q80V63 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Prdm4Q80V63 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Prdm4Q80V63 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Prdm4Q80V63 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.45■■□□□ 1.18
Prdm4Q80V63 Gm12504-201ENSMUST00000120860 2231 ntBASIC22.45■■□□□ 1.18
Prdm4Q80V63 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Prdm4Q80V63 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Prdm4Q80V63 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Prdm4Q80V63 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Prdm4Q80V63 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Prdm4Q80V63 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.43■■□□□ 1.18
Prdm4Q80V63 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Prdm4Q80V63 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Prdm4Q80V63 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.42■■□□□ 1.18
Prdm4Q80V63 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Prdm4Q80V63 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Prdm4Q80V63 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.41■■□□□ 1.18
Prdm4Q80V63 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Prdm4Q80V63 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.41■■□□□ 1.18
Prdm4Q80V63 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Prdm4Q80V63 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Prdm4Q80V63 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Prdm4Q80V63 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.41■■□□□ 1.18
Prdm4Q80V63 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Prdm4Q80V63 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
Prdm4Q80V63 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
Prdm4Q80V63 Gm37136-201ENSMUST00000194368 194 ntBASIC22.39■■□□□ 1.17
Prdm4Q80V63 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.39■■□□□ 1.17
Prdm4Q80V63 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Prdm4Q80V63 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Prdm4Q80V63 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Prdm4Q80V63 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
Prdm4Q80V63 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Prdm4Q80V63 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Prdm4Q80V63 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.38■■□□□ 1.17
Prdm4Q80V63 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Prdm4Q80V63 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prdm4Q80V63 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prdm4Q80V63 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prdm4Q80V63 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prdm4Q80V63 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.37■■□□□ 1.17
Prdm4Q80V63 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Prdm4Q80V63 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Prdm4Q80V63 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prdm4Q80V63 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Prdm4Q80V63 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
Prdm4Q80V63 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prdm4Q80V63 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prdm4Q80V63 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prdm4Q80V63 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Prdm4Q80V63 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.34■■□□□ 1.17
Prdm4Q80V63 Gm7432-201ENSMUST00000210343 879 ntBASIC22.34■■□□□ 1.17
Prdm4Q80V63 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prdm4Q80V63 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prdm4Q80V63 Gm5112-201ENSMUST00000204407 2368 ntBASIC22.34■■□□□ 1.17
Prdm4Q80V63 Gm34220-201ENSMUST00000223001 2709 ntBASIC22.34■■□□□ 1.17
Prdm4Q80V63 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Prdm4Q80V63 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Prdm4Q80V63 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Prdm4Q80V63 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Prdm4Q80V63 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prdm4Q80V63 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prdm4Q80V63 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Prdm4Q80V63 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prdm4Q80V63 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Prdm4Q80V63 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Prdm4Q80V63 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Prdm4Q80V63 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Prdm4Q80V63 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.31■■□□□ 1.16
Prdm4Q80V63 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Prdm4Q80V63 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.31■■□□□ 1.16
Prdm4Q80V63 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Prdm4Q80V63 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Prdm4Q80V63 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms