Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Exosc3Q7TQK4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Exosc3Q7TQK4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Exosc3Q7TQK4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.06■□□□□ 0.8
Exosc3Q7TQK4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Exosc3Q7TQK4 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Exosc3Q7TQK4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Exosc3Q7TQK4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Exosc3Q7TQK4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Exosc3Q7TQK4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Exosc3Q7TQK4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Exosc3Q7TQK4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
Exosc3Q7TQK4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Exosc3Q7TQK4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Exosc3Q7TQK4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Exosc3Q7TQK4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Exosc3Q7TQK4 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Exosc3Q7TQK4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Exosc3Q7TQK4 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Exosc3Q7TQK4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Exosc3Q7TQK4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Exosc3Q7TQK4 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Exosc3Q7TQK4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Exosc3Q7TQK4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Exosc3Q7TQK4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Exosc3Q7TQK4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.98■□□□□ 0.79
Exosc3Q7TQK4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Exosc3Q7TQK4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Exosc3Q7TQK4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Exosc3Q7TQK4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Exosc3Q7TQK4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Exosc3Q7TQK4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Exosc3Q7TQK4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Exosc3Q7TQK4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Exosc3Q7TQK4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Exosc3Q7TQK4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Exosc3Q7TQK4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Exosc3Q7TQK4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Exosc3Q7TQK4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Exosc3Q7TQK4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Exosc3Q7TQK4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Exosc3Q7TQK4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Exosc3Q7TQK4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Exosc3Q7TQK4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Exosc3Q7TQK4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Exosc3Q7TQK4 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Exosc3Q7TQK4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Exosc3Q7TQK4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Exosc3Q7TQK4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Exosc3Q7TQK4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.91■□□□□ 0.78
Exosc3Q7TQK4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms